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5. As described above, prior to a primer extension reaction, a solution containing the primer and double stranded template DNA are heated to 95 C and then cooled back to room temperature. Why is this step necessary Would it matter if you added the dNTPs or DNA polymerase before or after this step? Why or why not?

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As the DNA is in double helical structure, there will bo no space to bind the primer, to allow the primer to bind the DS DNA the first step in PCR is Denaturation i.e. heating at 95OC. The heating at 95OC will denature the DS DNA and it will help in the formation of SS DNAs, where the primer binds for further process. With dNTPS it wouldn't be any problem, but if we use normal polymease instaed of thermal stable polymearase likes Taq, Pfu etc... at that temperature the polymerase will denature and it couldn't carry PCR reaction. If it normal polymerase it is better to add after denaturation only.

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