8. (There are three main classes of plasmid vector used in S. cerevisiae: YEp, YCp and YIp plasmids. a) Which of these would you use in order to find the true complementing gene of a mutant phenotype and why?
b) Which of these would you use in a genetic (chromosomal) mapping study and why?
a) Yesat cemtromeric vector (ycp) vectors mey be used to find out the true complementing gene of a mutant phenotype, since ycp are the shuttle vector and these are considered low copy vectors and incorporate part of an ARS along with part of a centromere sequence (CEN). These vectors replicate as though they are small independent chromosomes and are thus typically found as a single copy. Unlike the ARS vectors, CEN vectors are stable without integration. So that they mey able to complement the mutant phenotype and rescue the wild type.
b) Yeast integrative plasmid (YIp), yeast vectors that rely on integration into the host chromosome for survival and replication, and are usually used when studying the functionality of a gene or when the gene is toxic.
These plasmids lack an ORI and must be integrated directly into the host chromosome via homologous recombination. So they used better for chromosome mapping studies.
8. (There are three main classes of plasmid vector used in S. cerevisiae: YEp, YCp and...
Please answer these four questions.
6C. A type of plasmid used frequently as a vector in recombinant DNA procedures carries gene markers for resistance to tetracycline (Tet') and to ampicillin (Amp). In one experiment, such plasmids were exposed to a restriction enzyme that cuts within the Amp' gene but leaves the Tet' gene intact. Plasmids exposed to the enzyme were next mixed with genomic restriction fragments from a cloned library of mouse DNA. The aim was to produce and detect...
12. If you used the PBLU plasmid as a vector to carry a desirable human gene into E. coli recipient cells. The insertion site is inside the B-galactosidase gene on the p-BLU plasmid. After the transformation, you plate the cells on LBA+amp+X-Gal to screen for E. coli cells with the desirable gene. You saw both blue and white colonies on the plate. Which type of colonies carry the desirable human gene? A. White B. Blue C. both D. neither one...
A plasmid used as a cloning vector in E. coli must have… Does sequence similarity between genes play an important role in assigning gene function? Successful insertion of a DNA fragment into the multi-cloning region (restriction sites) of a recombinant plasmid is detected by what changes? Understand the concept of (restriction enzyme produced) DNA fragment separation by gel electrophoresis. In addition to restriction enzymes, which enzyme(s) are required to insert a fragment of DNA into a cloning vector? What is...
S. Imagine that you set up a three-point mapping crus to determine the orier or three (linked genes. You have recessive mutations available for all three genes: Follow (1) 1hite (r) and echinus (ec). A heterozygous F, Drosophila female is crossed to a hemizygous mutant male. The observed numbers and phenotypes of Fz are as follows: 4685 yellow, white, echinus 4759 wild type 80 yellow 70 white, echinus 193 yellow, white 207 echinus 3 yellow, echinus 3 white Based on...
7. Explain the procedure for cloning DNA fragment into the plasmid PBR322 (shown on the right) (S pts.). The gene fragment of interest was obtained by digestion of chromosomal DNA with the restriction enzyme Sall and subsequent purification using agarose gel electrophoresis. Which antiblotic would you use in the final step of the cloning procedure, and Pst why? EcoR Sal Ampicillin Tetracycline resistanica(Ter Amp) PBR322 4,361 bp) Origin of replicatiorn (ori Pvull 8. Assume that your gene fragment from question...
QUESTION 11 a) The diagram below shows a typical plasmid cloning vector. There are three components ORI, amp and restriction enzyme recognition sizes. Explain the roles of each of these three components and explain why each is important for cloning genes. 6 marks] ORI Hindlll Sphl Pstl Sall Restriction Sites Xbal BamHI Smal Kpnl Sac EcoRI amp ORI role: importance: amp role: importance: Restriction sites role: importance: b) A technique called RT-PCR uses the enzyme reverse transcriptase (RT) in combination...
2. A dominant allele H reduces the number of body bristles that Drosophila flies have, giving rise to a “hairless” phenotype. In the homozygous condition, H is lethal. An independently assorting dominant allele S has no effect on bristle number except in the presence of H, in which case a single dose of S suppresses the hairless phenotype, thus restoring the "hairy" phenotype. However, S also is lethal in the homozygous (S/S) condition. What ratio of hairy to hairless flies...
Mapping genes with recombination frequencies in Drosophila 1. Suppose you know of three linked loci on the Drosophila X chromosome (a, b, and c). Assume that you are starting out with true-breeding stocks that show all three recessive traits and true-breeding stocks that show all three dominant traits. A. If you wanted to do a 3-point test cross to map the three loci, how would you set up the cross? What genotypes do you use for males and females in...
Mapping genes with recombination frequencies in Drosopna 1. Suppose you know of three linked loci on the Drosophila X chromosome (a, b, and c). Assume that you are starting out with true-breeding stocks that show all three recessive traits and true-breeding stocks that show all three dominant traits. A. If you wanted to do a 3-point test cross to map the three loci, how would you set up the cross? What genotypes do you use for males and females in...
1-1. You wish to insert a gene involved in the degradation of a toxic compound into a plasmid, and then use the plasmid as a vector to transform a species of bacteria so that it can be used in a bioremediation effort to clean up hazardous waste. In order to accomplish this, you will need to ______. SELECT ALL THAT APPLY. -digest both the gene and plasmid with the same restriction enzymes in order to yield appropriate "sticky ends" that...