Fragile X syndrome is caused by expansion of a trinucleotide repeat in the 5' UTR of the FMR-1 gene. What is the simplest way to detect this expansion?
Select one:
a. PCR using genomic DNA as template and two primers, one complementary to the repeat region and the other complementary to unique sequence, followed by gel electrophoresis
b. Direct exome sequencing using a microarray
c. Whole-genome sequencing
d. PCR using two primers that are complementary to unique sequences on either side of the repeat region, followed by sequencing the PCR products
e. PCR using genomic DNA as template and two primers that are complementary to repeats on either side of the expansion, followed by gel electrophoresis
A.PCR using genomic DNA as template and two primers one complementary to the repeat and other complementary to unique sequence followed by gel electrophoresis is the right option because fragile x syndrome is analysed by the number of CGG repeats in the chromosome and it is isolated by complementary unique and repeat sequences.
Fragile X syndrome is caused by expansion of a trinucleotide repeat in the 5' UTR of...
Fragile X syndrome, Huntington disease and Friedrich Ataxia are all examples of trinucleotide expansion disorders. a.Explain why it takes over 200 trinucleotide repeats in Fragile X gene before a patient shows symptoms, while individuals with Huntington disease display full penetrance only after 40 trinucleotide repeats in the huntingtin gene. b. Present an explanation of why such high repeat numbers are possible in Friedreich Ataxia. c. Trinucleotide repeat examples in human disease are far more numerous than tetranucleotide repeats. Give two...
The diagram shows the size and position of the exons (numbered)
and introns (lines) of a gene that codes for hypothetical Protein
X, which can exist as two isoforms (either 16 or
17 amino acid residues long). Why " A" is the correct answer, can
you please explain step by step. Thank you!
Which technique can be used to determine if a sample of cells
expresses both isoforms?
Synthesize cDNA from Protein X mRNA using
primers overlapping exons 1 and...
The mutation that causes Huntington disease involves a DNA segment known as a CAG trinucleotide repeat. Normally, the CAG segment is repeated 10 to 35 times within the gene. In people with Huntington disease, the CAG segment is repeated 36 to more than 120 times. The trinucleotide repeat region of the HD gene from six individuals, each of whom has one parent affected by Huntington disease has been amplified by PCR and subjected to gel electrophoresis. The figure shows the...
Huntington's disease (HD) is a late-onset fatal genetic disorder that causes the progressive breakdown of nerve cells in the brain. The disease is caused by an autosomal dominant mutation whereby an expansion of a CAG trinucleotide repeat is observed in the gene Huntingtin (HTT. Where normal individuals have up to 35 copies of the triplet, individuals with repeat regions containing more than 35 repeats are susceptible to HD, and all disease alleles with 42 or more repeats are completely penetrant....
1) You have two human liver cells (A and B) and you hypothesize that the insulin receptor gene in Cell A has a mutation in exon 1 and Cell B contains the wild type sequence. You extract genomic DNA from each of the cells. Of the following, what would be the most efficient (quick, precise and relatively cheap) way to test your hypothesis. a. Isolate protein from both cells, purify the insulin receptor, and determine the amino acid content. b. Sequence the...
2. PCR amplification of the TAS2R38 gene a. The number of copies of the 303 bp sequence grows exponentially (1-2-4-8-etc) after each cycle. The number of cycles we used is on page 97. What is the number of copies of the 303 bp fragment that will theoretically be present at the end of our reaction? b. Denaturation of the 303 bp segment of the TAS2R38 gene is a critical first step in the PCR perties of a DNA segment that...
Telomere Length Estimation Objective To estimate the length of telomeres on your extracted gDNA. Background Telomeres are repetitive nucleotide elements at the ends of chromosomes that protect chromosomes from degradation and genetic information loss. Normal diploid cells lose telomeres with each cell cycle. Telomere length, therefore, decreases over time and may predict lifespan. Telomere shortening has negative effects on health conditions and has been linked to many health issues including aging and cancer. Accurate and consistent quantification of telomere length...
1. Describe the functions of the following reagents in extraction of DNA from corn meal: proteinase K; guanidine HCI; SDS 2. Why is the ratio of the OD at 260 and 280 nm used to estimate DNA purity? 3. In one paragraph, summarize basic principles of PCR technique in your own words. List all the reagents you will need to perform a PCR experiment. Does this method tell you what genetic modifications were made? If yes, describe how you can...
For part 1 of this lab) I collected a soil sample from my campus
Part 2) Tested bacteria initial viability Part 3) DNA extraction
Part 4) DNA quantification by Nanodrop Part 5) Sample sequencing
Part 6) PCR amplification Part 7) Gel electrophoresis Part 8) DNA
sequence data analysis (sent sample to another lab)
Directions for Part 3 DNA extraction are in the attached
image
QUESTIONS REGARDING PART 3 (DNA extraction)
1) What type of conclusions can be made from initially...
explaim the mechanisms amd toxological effects if type 1
diabetes in this article
Exposure to arsenic in drinking water is associated with increased prevalence of diabetes. We previously reported an association of diabetes and urinary concentration of dimethylarsinite (DMAS"), a toxic product of arsenic methylation by arsenic (+ 3 oxidation state) methyltransferase (AS3MT). Here we examine associations between AS3MT polymorphism, arsenic metabolism and diabetes. Fasting blood glucose, oral glucose tolerance and self-reported diagnoses were used to identify diabetic individuals. Inorganic...